CDS
| Accession Number | TCMCG007C59184 |
| gbkey | CDS |
| Protein Id | XP_009118199.2 |
| Location | complement(join(42854944..42855004,42855141..42855209,42855301..42855417,42855580..42855692,42855779..42855853,42855929..42856596,42856678..42856893,42856984..42857346,42857425..42857587,42857677..42857820,42857901..42857975,42858192..42858262,42858352..42858454,42858543..42858769,42858850..42858967,42859049..42859179,42859540..42859564)) |
| Gene | LOC103843250 |
| GeneID | 103843250 |
| Organism | Brassica rapa |
Protein
| Length | 912aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009119951.3 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATACAAGCTGCAGGAGTTCTTGGCACATTCAGCAAATGTGAATTGTCTAAGTATCGGAAAGAAGACAACACGGTTCCTTATAACCGGCGGAGATGACTGCAAGGTCAAACTCTGGTCAATCGGCAAGTCTACCTCTCTAACGAGTCTTTGTGGACATACAAGCCCTATTGACTCAGTAACTTTCAACTCGGAAGAAGCTTTGGTCCTCGCTGGAGCTTCTTCCGGTGTGATTAAGCTGTGGAATCTACAAGAAGCAAAGGTGGTTCGAGGTTTTACTGGACACATATCAAACTGTTCTGCTCTTGAGTTTCATCCGTTTGGTCAATACCTTGCGTCTGGATCTAGTGACGCAACTCTAAAGATTTGGGATATCAGAAAGAAAGGATGCATCCAAACGTATAAAGGTCACACTCGTGGCATTAGTACTGTCAAATTTACTCCTGATGGGCGTTGGTTAGTGTCTGGTGGACTTGACAACGTTGTAAAGATTTGGGATATAACTGCTGGAAAGCTCTTGCATGAGTTTAAGTTTCATGATGGACCTATCCGTTCCCTAGACTTCCACCCTCTTGAGTTTCTCCTAGCCACTGGTTCTGCTGACAGGACTGTGAAGTTCTGGGATTTAGAAACGTTTGAATTGATTGGATCTACTAGACCAGAGGCCACTGGAGTTCGCTCAATTGCTTTTCATCCAGATGGAAGAACCCTTTTCTGTGGATTGGATGATAGCTTGAAGGTTTATTCATGGGAACCAGTGATATGCCGGGATAGTGTTGAAATGGGATGGTCAACCCTTGGTGACTTCTGCATCAACGAAAACAAGTTCGTTGGCTGTTCATATTACCGAAACTCTGTTGGGATTTGGGTCTCAGATATATCGAAACTTGAGCCGTATGGAGCTGGATCTGAGGATGAGAATGAATGCATGGTGAAAAGATTCAGTGTCTTGGATGAGCAGGCTTCTGAGAGAAAGGGGTGTGGCTCAAGGGGAAGTTCATCCCCGGACTATGAGACAAAAGAGATAAAGAACATATACGTTGACTCCATAGGTGGAACTTTGAAAGGGGCTATTAGGGCGAGCGAGAAGCAGAATGCAGATGACAAGTCTTCAAGAATGCATAGTGTTGTGGATAGTGATAGTGGGGAAGAATCTTCTCATTCAAGAAGTGAATCTGTCGCTTCCTCAAAAACTAATCCCGGAATGATGCTAAGACCAGCTCATGTAAGAAAGACTCTAGCAAAGTTTGAAGAATCAGCGTCTGTTCAATATGGAACTCGGAAGAAAAGCTCACAAGATATTGAAGAGGAGACACAAACTCGAAATGCTGAAGACTCAACCATCAAGGGGATTATGTACAAGTTTGAAAAAGCTTTATCATCCGAACCACCAACTGATGAAGCAACTCGCATGCTGCATAAGCCACCTCGTGTACAGAGGTCATCCTATAACAACAACCACAATGAGTCAAGACGAGCAATGTCTGTTGATTCAGCGACTCTCAACAACAGCAAAGGTGGGTTGGAGTACTCAGGTAGAAACGTTGAGGATACAAATGACCAGCACAGTTCCACCAAAACTGAAAGAGTTCTTTCACCAGAAAAGCCTGGTGATGAACAGACAATAAAAGTTGTCTCCGGGAGAACACGCTCATTAGTTGAGAGGTTTGAGAGAGGAGAAAAAATTACCCATACAGAAGAAGCAGATAATACTAATGCAGTGGAGCAAGATCCGGATAAGACATCAAGACAGACAGGTGAAGCTCCTGTGGTAGTATCTACACGGCGAGCTAGAAGTACTCCAGCTCGAGTGATGCCTATTGTACTCAACATGAAATCTGATGAGCCTCCTTCAACACAACCAGCTAGGACTTCTTCAGTTCCAGTGATACTCAACCAGTCTACTAATGATGAGCCTTCTGTATCATTAACACAATCTAGAACCTCTCCAGCCCGGACATTGCCTTTGACACTCAATCAGGCAACACATATTGTTTTGTCAAGAAGACCACGTAGGACTTCCTCAGCTCGAGTAAGGCCTATGTCACTTAGTCAGGCAGTGAGCATGACATCTCATGAGTGTTCTGTAACATCAACACGTCCAGATAGGACTTCACCTGCCCGTGTAACTCAAATGCTGGCTACACCACCCACTGAGATTGATCAGGTGGCTGATATGGCTCAGGATGAGACACATTTATCATCACAAACTGATAGTGACATCACTGAGAATCTAATGCAAACTCATGAGGAGTTCTTAAGCACTCTTCAATCTAGATTGACAAAGTTACAAATTGTTAGGCATTTTTGGGAACGTAGCGATGTTAAAGGGGCAATAGGGGCTCTGAGAAAGCTGACAGATCAGTCTGTTCAAGCAGATGTGATCAGTATTTTAACAGACAAGATAGAGATTCTTACATTGGATATGTTCTCTCAATTGGTCCCTGTCCTTACAAGCTTATTGGGTAGCAGGACAGAAAGGCCTGTTAATGTGTCCTTGGACATGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATACGCTCAACTGTCACAGCTCCAAGGATAGTCGGCGTTGATCTTCATGCGGATGAAAGGATACAAATCTGCCAAGTTTGTTCTGCGGGACTGCACAAGATTCAAAGGATTCTTCCAATTCTCGCAAGAAGAGGCGGTCTAATAACAAGAAAGGCTCAAGAACTAAACCTTGTTCTTCAACAAACATAG |
| Protein: MAKRGYKLQEFLAHSANVNCLSIGKKTTRFLITGGDDCKVKLWSIGKSTSLTSLCGHTSPIDSVTFNSEEALVLAGASSGVIKLWNLQEAKVVRGFTGHISNCSALEFHPFGQYLASGSSDATLKIWDIRKKGCIQTYKGHTRGISTVKFTPDGRWLVSGGLDNVVKIWDITAGKLLHEFKFHDGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIAFHPDGRTLFCGLDDSLKVYSWEPVICRDSVEMGWSTLGDFCINENKFVGCSYYRNSVGIWVSDISKLEPYGAGSEDENECMVKRFSVLDEQASERKGCGSRGSSSPDYETKEIKNIYVDSIGGTLKGAIRASEKQNADDKSSRMHSVVDSDSGEESSHSRSESVASSKTNPGMMLRPAHVRKTLAKFEESASVQYGTRKKSSQDIEEETQTRNAEDSTIKGIMYKFEKALSSEPPTDEATRMLHKPPRVQRSSYNNNHNESRRAMSVDSATLNNSKGGLEYSGRNVEDTNDQHSSTKTERVLSPEKPGDEQTIKVVSGRTRSLVERFERGEKITHTEEADNTNAVEQDPDKTSRQTGEAPVVVSTRRARSTPARVMPIVLNMKSDEPPSTQPARTSSVPVILNQSTNDEPSVSLTQSRTSPARTLPLTLNQATHIVLSRRPRRTSSARVRPMSLSQAVSMTSHECSVTSTRPDRTSPARVTQMLATPPTEIDQVADMAQDETHLSSQTDSDITENLMQTHEEFLSTLQSRLTKLQIVRHFWERSDVKGAIGALRKLTDQSVQADVISILTDKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIRSTVTAPRIVGVDLHADERIQICQVCSAGLHKIQRILPILARRGGLITRKAQELNLVLQQT |